Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931089.1_cds_XP_016477994.1_69667
CDS Infomation

[gene=LOC107799399] [db_xref=GeneID:107799399] [protein=protein SCAI-like isoform X2] [protein_id=XP_016477994.1] [location=join(40263..40399,41530..41917,42526..42726,42880..43122,43639..43705,43848..44000,45562..45653,49747..49929,50010..50146,51027..51246)] [gbkey=CDS]
Sequence

ATGTCTCAGCATCAGCAAAACAGCAACAGTAGCAATAACATTAACATACCAGTGAGCGAA
GTTTATTGGACCCTCGTTGCTAAAGCCGATAAGAAGTTCTCCAAAATTCGAGATTTGCCC
TACTACCAACGTAACAGATATGATACATACTTCTACAAGGTTTTCAAGGTATACACACAG
TTGTGGAAGTTTCAACAAGAGAATCGGCAGAAGTTGGTGGAAGCTGGTCTCAAGAGATGG
GAGATTGGGGATATTGCATCTCGGATTGGCCAGCTTTATTTTGGACAGTACATGAGGACA
AGCGAGGCCAACTATTTGTCTGAGTCTTATATCTTTTATGAGGCAGTGTTGACTAGGGAG
TATTTTAAAGATGGAATGTTTCAGGATGTTAATCTTGCTAGCAAGCAACTTCGATTTCTT
GCTCGGTTTATGACAGTTTGTTTGGTTTTGAATCGGCGAGACATGGTTTATCAATTAGTT
AATCAGCTCAAGATGTTGCTTGATGAATGCAAGAGGGCATTCCAGGAAACTGATTTTAAA
GAATGGAAGCTGGTGGTTCAGGAAATAGTTAAGTTTCTAAAAGCTGACTCGGCTTTTATG
AATACCAGGCCATTGAGATATAGTGTCGTATTGGATCTTCATCCAGATTGCCTGCCACAA
GTTGTTGAAGCAAAGAGAAAGCTAAGATTACGAGATACACTATTGTGCAGCTACCATCCC
AATGAGGTTAAATATTCAGAACTGACTCTTGACACTTTCCGAATGCTACAATGTCTGGAG
TGGGAACCTAGTGGGTCATTTTATCAGACGGGTGGGATTCCTCCAAGTGGGGCTGGAACT
GGTATTGGCCAGAATGGGGCACCCGGACCCAGTCGTGTTAATTATTCACAAGATATATCT
GATCCTACTCTGCCTCCTAACCCTCGCAAGACCATCCTATATCGCCCGTCTGTTACAAAT
TTTTTAGCAGTTTTGGCGGCAATCTGCGAGGAGCTATCTCATGATGGAGTTCTTTTACTA
TATTTATCTGCTGCAGGGAGAAGCTTTATGTCTCGTGCTGTTGACTTAGAAGCCACCTCT
ACATCTTCGCTGAACTCTGATATTGAAATTGCAAATACCACTTCTACCAGGGAGGATTGC
TTAAGTGAGCAGAGTAGTTGCGTATACATTGGTTCTCGTGGAACTGGAGGTGTGAATGGG
ATTTATCCATGTGACTTGTTGCCATTCACTAGAAGACCGCTTTTTCTGGTCATGGACAGT
GACAACAGTAAAGCATTCACGGCCTTAAGTGGATCAGAGAAGGGAGAACCAGTTGCCATG
CTACTCTCTCCCACAATTTCACTGCCTATATCTGCTATGGATTCTTCTCGTCAGCCAAGT
GGAAGCTCATTCACCAGTTTTCTTACAGTTCCTTTACAAGCTTTCATTTTGATGCTTGGT
TTCACAGTTTCTGACATTGACATGGATATGTATGGGAAGGCTGAGAAACTTCTTTCTTCA
TCATTAAATGAGTGGGGTTTGTTACTGGCAGCATCAGACAATCTTAATCCTGTTTGGTCT
CAAACTCTTGGAGATCCATTTTTACGGCGGCTCATTTTAAGATTCATATTCTGTCGGGCG
GCGCTGGCACTCTACGCTCCAACCTTCAACAAGATAGAATTTCTCCCCGAATGCATCCCT
TGCCTTCCAGATGCTGTCCTGCCAACAAGTGCTGCCTGTCAAAGGAATGTGTTGCAACTT
GCTGATATCTTTGGTGCAACTAGCAAGTTCAATTTTTCAAAAGAGATGGTGCTTTCCGAT
AACAGAAGCCAGGAGAACTGA

Peptide Sequence

PEP ID

XP_016477994.1
PEP Infomation

PREDICTED: protein SCAI-like isoform X2 [Nicotiana tabacum]
Sequence

MSQHQQNSNSSNNINIPVSEVYWTLVAKADKKFSKIRDLPYYQRNRYDTYFYKVFKVYTQ
LWKFQQENRQKLVEAGLKRWEIGDIASRIGQLYFGQYMRTSEANYLSESYIFYEAVLTRE
YFKDGMFQDVNLASKQLRFLARFMTVCLVLNRRDMVYQLVNQLKMLLDECKRAFQETDFK
EWKLVVQEIVKFLKADSAFMNTRPLRYSVVLDLHPDCLPQVVEAKRKLRLRDTLLCSYHP
NEVKYSELTLDTFRMLQCLEWEPSGSFYQTGGIPPSGAGTGIGQNGAPGPSRVNYSQDIS
DPTLPPNPRKTILYRPSVTNFLAVLAAICEELSHDGVLLLYLSAAGRSFMSRAVDLEATS
TSSLNSDIEIANTTSTREDCLSEQSSCVYIGSRGTGGVNGIYPCDLLPFTRRPLFLVMDS
DNSKAFTALSGSEKGEPVAMLLSPTISLPISAMDSSRQPSGSSFTSFLTVPLQAFILMLG
FTVSDIDMDMYGKAEKLLSSSLNEWGLLLAASDNLNPVWSQTLGDPFLRRLILRFIFCRA
ALALYAPTFNKIEFLPECIPCLPDAVLPTSAACQRNVLQLADIFGATSKFNFSKEMVLSD
NRSQEN

Transcript Sequence

Gene sequence data has not been registered.